PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.S1K9U

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 88aa MW: 10300.4 Da PI: 4.2403

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.S1K9U	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	21.5	7.7e-07	51	87	1	39
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskeg 39 kfY++YAk + Fs+r+++++++ ++ei+++ +Cs+e Aradu.S1K9U 51 KFYRNYAKAADFSTRVRSTNRK--ENEIKNQLITCSREE 87 6**************98887..7779******985 PP

Sequence ? help Back to Top
Protein Sequence Length: 88 aa Download sequence Send to blast
MDYSTSDFQL NQGEVDYEFE SNEVLEPLSV VDDQFVPKVE MTFTILEDAG KFYRNYAKAA 60 DFSTRVRSTN RKENEIKNQL ITCSREEK

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.S1K9U

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HQ637178	4e-64	HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020958614.1	8e-46	uncharacterized protein LOC110262592
TrEMBL	A0A444XXF5	2e-50	A0A444XXF5_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21	14	477