PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.S26L2
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family Dof
Protein Properties Length: 327aa    MW: 35284.7 Da    PI: 8.7938
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.S26L2genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof125.22.1e-3956116262
       zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                  ke+al+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrn+PvGgg+rknk+ss
  Aradu.S26L2  56 KEQALNCPRCHSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRSS 116
                  7899******************************************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074785.0E-2750108IPR003851Zinc finger, Dof-type
PfamPF027012.0E-3358114IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.98460114IPR003851Zinc finger, Dof-type
PROSITE patternPS0136106298IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    Send to blast
MDTAQWPQEI VVKPIEEIVV GTNTSSCHQS KPPSSNNLAS ENNNNNNTIK KPRPQKEQAL  60
NCPRCHSTNT KFCYYNNYSL TQPRYFCKTC RRYWTEGGSL RNIPVGGGSR KNKRSSTSIS  120
SSPSPPSPNK NIKLIGKVVH QGQDLNLAFP SDLVVHQQNN NNNNNTLSSS SSSSTITSTV  180
TTTTTTTPPS STTQFSAMEL LTGITSANSR GGLGLNSFLP HHPPDPNTVL YNNSTFALQD  240
FNKTAGLNFS LDGIGIGIVG SGFAGLHHHQ QDQTSGGGNN NGRLLFPFED LNQVSNADAI  300
DHQSNSKVHQ QGDSSGYWSG MLGGGSW
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.S26L2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT2022869e-56KT202286.1 Prunus dulcis dof zinc finger protein (dof) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015940439.10.0dof zinc finger protein DOF4.6 isoform X1
TrEMBLA0A445BJ620.0A0A445BJ62_ARAHY; Uncharacterized protein
STRINGXP_007161571.13e-91(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF67434137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64620.12e-36Dof family protein