PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.S93F6

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

BES1

Protein Properties

Length: 95aa MW: 11021.9 Da PI: 11.0178

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.S93F6	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	162.6	2.5e-50	2	75	1	74
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgsk 74 ++++r ptwkErEnnkrRERrRRaiaaki+aGLR++Gn+klpk++DnneVlkALc+eAGw+ve+DGttyrk ++ Aradu.S93F6 2 TSGTRLPTWKERENNKRRERRRRAIAAKIFAGLRMYGNFKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKVTN 75 5899******************************************************************9876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	1.6E-47	3	76	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 95 aa Download sequence Send to blast
MTSGTRLPTW KERENNKRRE RRRRAIAAKI FAGLRMYGNF KLPKHCDNNE VLKALCNEAG 60 WTVEPDGTTY RKVTNLTPLK RVPVILFYLI GIMVS

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	2e-21	6	72	372	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	2e-21	6	72	372	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	2e-21	6	72	372	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	2e-21	6	72	372	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase

Functional Description ? help Back to Top
Source	Description
UniProt	May function in brassinosteroid signaling. {ECO:0000250}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.S93F6

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016702634.1	1e-46	PREDICTED: BES1/BZR1 homolog protein 4-like isoform X1
Refseq	XP_016702636.1	1e-46	PREDICTED: BES1/BZR1 homolog protein 4-like isoform X2
Swissprot	Q5Z9E5	1e-28	BZR3_ORYSJ; Protein BZR1 homolog 3
TrEMBL	A0A1U8KJC4	2e-45	A0A1U8KJC4_GOSHI; BES1/BZR1 homolog protein 4-like isoform X1
TrEMBL	A0A2P5WYB4	6e-46	A0A2P5WYB4_GOSBA; Uncharacterized protein
STRING	XP_010675300.1	2e-40	(Beta vulgaris)
STRING	XP_009352718.1	7e-40	(Pyrus x bretschneideri)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF15152	11	13

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78700.1	1e-28	BES1/BZR1 homolog 4

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764]