PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.SC4Y7
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ERF
Protein Properties Length: 124aa    MW: 14163.8 Da    PI: 5.7322
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.SC4Y7genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.52.5e-11242451
          AP2  4 kGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51
                 +GV++  k+ +W A I++      +k+++lg+ g+ eeAa ++++a+ 
  Aradu.SC4Y7  2 RGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEEAAHLYDRAAF 42
                 9**98..47*********4.....5********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003807.3E-4257IPR001471AP2/ERF domain
SuperFamilySSF541716.28E-8245IPR016177DNA-binding domain
PfamPF008471.3E-5244IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.6E-7351IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 124 aa     Download sequence    Send to blast
MRGVYFKNMK WQAAIKVDKK QIHLGTVGSQ EEAAHLYDRA AFMCGREPNF ELPEEEKREL  60
RKFKWEEFLA LTRQAITQHK RRLGSGPSDN VDLSNSNKDD SDNKQGVSSL SACEEDAEQE  120
TSLS
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.SC4Y7
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1483111e-64BT148311.1 Lotus japonicus clone JCVI-FLLj-4D9 unknown mRNA.
GenBankKC3577121e-64KC357712.1 Lotus corniculatus cultivar Leo AP2/ERF mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015960142.16e-86ethylene-responsive transcription factor-like protein At4g13040
SwissprotQ56XP95e-39ERFL1_ARATH; Ethylene-responsive transcription factor-like protein At4g13040
TrEMBLA0A444WQE73e-87A0A444WQE7_ARAHY; Uncharacterized protein
STRINGXP_007140664.12e-63(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54573253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.23e-26ERF family protein