PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.SG4XA
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family GRAS
Protein Properties Length: 313aa    MW: 36351.9 Da    PI: 9.8998
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.SG4XAgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS238.9e-08120166347
         GRAS   3 elLlecAeavssgdlelaqalLarlsel.aspdg.dpmqRlaayfte 47 
                  e L+++A+++++++l+ a+ +L rl+++ +sp g +p+qR+++yf++
  Aradu.SG4XA 120 EELIRAADCFDTNHLHVAHVILDRLNQRlRSPVGaKPLQRVTFYFKK 166
                  78*************************999***99**********86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF035143.1E-5120166IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    Send to blast
MNVFLVLDLC RSPTPEKAAL LATAPNTQQE GLDQLEDHVL HNLDWDSIMK DLGFHEDSNL  60
PLFKTTLPNV PDFSPSFDPH FEFPDIQTIS YKYANATATL DRLLHDTSNN SPATGFDFNE  120
ELIRAADCFD TNHLHVAHVI LDRLNQRLRS PVGAKPLQRV TFYFKKRSGS WWRGGESLTV  180
NVKEKRKFTT LSERVVTMSL CFYQGFENRI SHRTALVTGS LIYRFNRFDR ARRRLQGFNR  240
TCNRESGRQQ HQVTKQWWST FEWTMAASRW RWLFEGRTAA QRRWLGEGTT AAARLGGCSN  300
ERRWRHDAVA GWR
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.SG4XA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020979252.13e-99scarecrow-like protein 15
RefseqXP_025653092.11e-100scarecrow-like protein 15
RefseqXP_025698816.11e-100scarecrow-like protein 15
TrEMBLA0A444WS771e-98A0A444WS77_ARAHY; Uncharacterized protein
TrEMBLA0A444WS981e-98A0A444WS98_ARAHY; Uncharacterized protein
STRINGGLYMA11G06980.13e-43(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36710.11e-24GRAS family protein