PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.SGG9Q
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family M-type_MADS
Protein Properties Length: 456aa    MW: 52236.7 Da    PI: 7.5544
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.SGG9QgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF40.73e-131051243
                 ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT CS
       SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsst 43
                  i+n++ r+++f +R+ gi+KK    S LC +e+++ii++ +
  Aradu.SGG9Q 10 CIKNERERKISFMQRKDGIMKKIATFSKLCKVEACLIIYGDD 51
                 69**************************************87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF554555.76E-16174IPR002100Transcription factor, MADS-box
PROSITE profilePS5006615.082150IPR002100Transcription factor, MADS-box
SMARTSM004322.3E-8160IPR002100Transcription factor, MADS-box
PfamPF003191.3E-101151IPR002100Transcription factor, MADS-box
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005747Cellular Componentmitochondrial respiratory chain complex I
GO:0003677Molecular FunctionDNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 456 aa     Download sequence    Send to blast
MGRGKTVYEC IKNERERKIS FMQRKDGIMK KIATFSKLCK VEACLIIYGD DSSQPMIWPQ  60
EHSKVQSIIE KYEVQKNNET RPIIFDEEEF FKNKKIMIEA EISKLRKKVL KFKYPTMDPI  120
FTTLDGNQLM EFIALVNTKI EACKKRIDML KESNQDNGSN FNVDQSQSQL NFMNNIPNHD  180
YALHHDNLVY QTQNPKFDPN VTYFVANNNG VIMDSTSQVN VSLDCSTTNQ VAVMDSKEKN  240
VIVDSTNQIS KDGDLINWDD FIEVENWIDQ LQYETNLKDI LSHQSQNVSQ SSQILPPITM  300
NGFLADEKNN NHQFQSFNMY KGPKPKRDFL AHWVSKNDDV VCTLLIYVGA AFLFTVLVNR  360
ALSRIAPVAD PGRVVKSFAV IMGLTNFVLT VAGVSAVVLL LRSDVKQSAN IFRRNVKHIR  420
NWLEEETAAS SKEMQKSAKE LESKVPPKET PKEDKH
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.SGG9Q
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015951345.20.0agamous-like MADS-box protein AGL80
TrEMBLA0A445E7K00.0A0A445E7K0_ARAHY; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28700.12e-14AGAMOUS-like 46