PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.SU4AL
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 229aa    MW: 26133.9 Da    PI: 9.0184
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.SU4ALgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR158.81.8e-1851137191
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                  kfY++YAk vGFs+r+++++k+   +ei+++  +Cs+egk +++ +    +++t+ +   +C a++ ++  k  g w ++k++l+H+H+++p
  Aradu.SU4AL  51 KFYKDYAKAVGFSTRVRSTNKK--GNEIKNQLITCSREGKWKSKISP---TEKTNFTAGLNCLARIYIHTLKdVGAWIISKVVLHHSHPCCP 137
                  6****************98887..8889*************998877...8999**************998879***************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.6E-1551137IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    Send to blast
MDDSTSDCQL KQGEVDFEFE SNKVPEPLCI VDDQFVPKVG MTFNTLEDAA KFYKDYAKAV  60
GFSTRVRSTN KKGNEIKNQL ITCSREGKWK SKISPTEKTN FTAGLNCLAR IYIHTLKDVG  120
AWIISKVVLH HSHPCCPTQA EMLKQHRELN ISLRRPSYMG SNLSGSPLLG RNEKHTKERE  180
HAFIFLTSLL PETAHLFNLL NDTIIASEAG RKQRENQMLQ IFIRSYRVQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.SU4AL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371781e-128HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020992539.15e-93protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_020997160.12e-93protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444YSY68e-96A0A444YSY6_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477