PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.SYI1K
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family Trihelix
Protein Properties Length: 415aa    MW: 48130.1 Da    PI: 4.4381
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.SYI1KgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix44.34.7e-14187271286
     trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                  Wt++e+ +L++a  ++  + +r++l+   W+ev++k+ +  ++er+  qC+++++ l+k+ykk+k+ ++k  s++  +++yf++++
  Aradu.SYI1K 187 WTERETFVLLDAWGDKFLQHGRKSLRSEEWQEVAEKVsKVSKIERKDAQCRNRLDTLKKKYKKEKAKSEKMGSGT-CKWVYFQRMD 271
                  *************************************666789**************************985555.59*******8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.6E-4186255IPR009057Homeodomain-like
PfamPF138379.4E-21186273No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 415 aa     Download sequence    Send to blast
MDGTEDDDLR YPSNPYGVNH QGYGYLSHRR LPVRTSQYLQ PVANDFVEHN DNANDNEEEK  60
EDEEDEDEEQ IIEEDHDDGD DVDSQRNAVP NNVEEGDDED RDGDEIGGNN DDGEEEDDEE  120
DEEDDDDAKP KIYSMKVDDD MEWHPKKRKL KSLISAYEFA PRVPVPSAAA PSTPKPSSGG  180
RNSLTDWTER ETFVLLDAWG DKFLQHGRKS LRSEEWQEVA EKVSKVSKIE RKDAQCRNRL  240
DTLKKKYKKE KAKSEKMGSG TCKWVYFQRM DKLMSSPVQQ PGLSCGLDSG EYVFTNPRVY  300
LNRANGFDQM RDSPGNSESF GEQGSNGHKH KKRRYARYSN DDASSFRLLA NSIQKFGEIY  360
EKIENSRRQQ MVELEKMRME FHKDLETQKR QILERVQSEI SKLHQRDDDE EENDD
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.SYI1K
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020985940.10.0trihelix transcription factor ASIL1
TrEMBLA0A444XC700.0A0A444XC70_ARAHY; Uncharacterized protein
STRINGGLYMA13G43651.21e-143(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24413480
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24490.11e-68Trihelix family protein