PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.T21RI

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 473aa MW: 53721.4 Da PI: 9.8845

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.T21RI	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	38.9	2.8e-12	365	429	29	91
FAR1 29 tkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 k+tf Cs++ +r + + t+++r +++etr+gC a+++v+ + ++ w+ t +++eHnHel+p Aradu.T21RI 365 FKQTFLCSRQRFRIFRGVDeTKRKRAPKSETRCGCIAQMRVHIDVgRDWWYETLFQSEHNHELMP 429 4789*******98877646788889*************99999999********986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	4.8E-10	365	429	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence Send to blast
MLTVLRSNDR AKLQNNTGAI PGDQNGGRAA PIAACSSVTT SIRNNGHRSD NTSPHHHILS 60 SRRPAQRWIP PSAATDATTT TGYSSSTVAV IPPSHSMFVP FSLRNLARMT ATGWPLASTM 120 AHDDSLMDDC DTTFSNNSAE EVAMARRLDG GGNAAPPSSR LTLLPLLPLR FSFLPSLYSM 180 KLRRFGRKKG FWWLREVKAA ARVSFDIKGS TKIEGFSDLV HKGIAKQLKI DNFLDLLHKR 240 TSKIEGLFDF LFVELLQICG KTCPNFLVCK NIAFDKMVDL IGESSHNHIE NVSVENVAEM 300 EELLVDSDGI DVENLLLNST RSIGRVNFVG LSVNAAKKYV FLDFDVSYAF YNAFEKINGF 360 LIRKFKQTFL CSRQRFRIFR GVDETKRKRA PKSETRCGCI AQMRVHIDVG RDWWYETLFQ 420 SEHNHELMPP TLSRMLRSQR RMTDEDSKNE RHKRCWNFHN PNIYAFCRAI WWF

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence Send to blast

MLTVLRSNDR AKLQNNTGAI PGDQNGGRAA PIAACSSVTT SIRNNGHRSD NTSPHHHILS  60
SRRPAQRWIP PSAATDATTT TGYSSSTVAV IPPSHSMFVP FSLRNLARMT ATGWPLASTM  120
AHDDSLMDDC DTTFSNNSAE EVAMARRLDG GGNAAPPSSR LTLLPLLPLR FSFLPSLYSM  180
KLRRFGRKKG FWWLREVKAA ARVSFDIKGS TKIEGFSDLV HKGIAKQLKI DNFLDLLHKR  240
TSKIEGLFDF LFVELLQICG KTCPNFLVCK NIAFDKMVDL IGESSHNHIE NVSVENVAEM  300
EELLVDSDGI DVENLLLNST RSIGRVNFVG LSVNAAKKYV FLDFDVSYAF YNAFEKINGF  360
LIRKFKQTFL CSRQRFRIFR GVDETKRKRA PKSETRCGCI AQMRVHIDVG RDWWYETLFQ  420
SEHNHELMPP TLSRMLRSQR RMTDEDSKNE RHKRCWNFHN PNIYAFCRAI WWF

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.T21RI

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A445BHI6	1e-137	A0A445BHI6_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF30184	2	2

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	2e-12	FAR1-related sequence 11