PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.T6Y1P
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family B3
Protein Properties Length: 480aa    MW: 55894.4 Da    PI: 10.7345
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.T6Y1PgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B337.63.9e-12271001896
                  --HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SSSEE..EEEE CS
           B3  18 lpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.grsefelvvkv 96 
                  l kkf++++g++  ++  l l++++g +W+v+   +k++g+++++kGWkeFv    L+ g  + F+++ g  + +  v++
  Aradu.T6Y1P  27 LTKKFTTQYGSVVSNP--LYLKSRDGIEWKVYW--TKHDGAILFKKGWKEFVAYYSLDHGHLLWFEYNiG--TSHIEVRI 100
                  789******9996665..***************..*******************************9733..33335555 PP
2B342.51.2e-132713551299
                  HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
           B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                  +++  +++ kf++++ ++++++  +++     + + vkliyr +s+  ++++GW+ F++a +L++gD+++Fkl++r++  + v+++r+
  Aradu.T6Y1P 271 TRAPCYFSTKFFRKYFENNPQNANIRFG---KKLFPVKLIYRPSSCVAFISAGWNLFARASKLQAGDVCLFKLINRKDPVFDVHICRR 355
                  4444577899999997676777777754...499****************************************9999989*****98 PP
3B342.61.1e-133954781299
                  HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
           B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                  +++r  l+  f +++ +k+++  +++l+    +sW  ++iy+ +s+  ++++GW++F++a +L++g +++F+l++ ++  + v+++r+
  Aradu.T6Y1P 395 RRSRPNLSAIFYRKYFKKNQQ--DVKLQF-GKESWPATIIYNPSSKNSFISAGWSSFARASKLEVGNVCIFELINGKDL-FDVHICRA 478
                  455677888899999766445..566544.669*****************************************86444.69999997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5086310.71510104IPR003340B3 DNA binding domain
SuperFamilySSF1019362.55E-1313111IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.103.5E-1315105IPR015300DNA-binding pseudobarrel domain
SMARTSM010190.004421104IPR003340B3 DNA binding domain
PfamPF023624.1E-927100IPR003340B3 DNA binding domain
CDDcd100176.48E-829102No hitNo description
SuperFamilySSF1019366.15E-13255355IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.103.4E-15257355IPR015300DNA-binding pseudobarrel domain
CDDcd100173.77E-11259354No hitNo description
SMARTSM010192.0E-5261356IPR003340B3 DNA binding domain
PfamPF023626.1E-12271356IPR003340B3 DNA binding domain
PROSITE profilePS508639.263302356IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.0E-18377479IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019364.71E-16378478IPR015300DNA-binding pseudobarrel domain
CDDcd100172.78E-13383477No hitNo description
PROSITE profilePS5086310.503384479IPR003340B3 DNA binding domain
SMARTSM010197.0E-10385479IPR003340B3 DNA binding domain
PfamPF023622.4E-11398478IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 480 aa     Download sequence    Send to blast
MKTLHANVRH HIVITVANIR FITLQKLTKK FTTQYGSVVS NPLYLKSRDG IEWKVYWTKH  60
DGAILFKKGW KEFVAYYSLD HGHLLWFEYN IGTSHIEVRI YDMSCHEIKY PANDQIKEQS  120
PCRGQQPVKR PKEPKIIDVD SSPNTQNMRL NEGQQKKRLN EPRSGGVRGQ QRKKMRALVS  180
SASKSRQLED DAQIRNVERS LNSHDIKSKE KNHEMPVSVN RDSNGKRNRR RKDSESPVMP  240
CPTRLESLKE AKKFKWEKPS FIIKITQRSQ TRAPCYFSTK FFRKYFENNP QNANIRFGKK  300
LFPVKLIYRP SSCVAFISAG WNLFARASKL QAGDVCLFKL INRKDPVFDV HICRRQRRES  360
LSKPVTRVIQ LPKEAKELNS QNPSFMVKIK DSDPRRSRPN LSAIFYRKYF KKNQQDVKLQ  420
FGKESWPATI IYNPSSKNSF ISAGWSSFAR ASKLEVGNVC IFELINGKDL FDVHICRAQC
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.T6Y1P
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015946907.10.0B3 domain-containing protein LOC_Os12g40080
TrEMBLA0A444XAQ70.0A0A444XAQ7_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15597210
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-15B3 family protein