PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.TB2PX
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 170aa    MW: 19345.8 Da    PI: 4.1511
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.TB2PXgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR126.52.1e-08127167143
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkree 43 
                  +fY++YAk+ GF  r+ +s+k+   +  ++++fvC ++g+r++
  Aradu.TB2PX 127 EFYQQYAKHHGFGARRFRSEKH--GEVRIRQEFVCHRQGYRSP 167
                  6***************999888..77789***********987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.3E-5127167IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    Send to blast
MASPSPSMER RYPRGVHVAE EAEMYDGADH GVGSVEGEGF AGMESDEYDL QEDETEHDHH  60
AEADVDNGDA VELEDNLDGV GGMSDNYADD DLYAVDFGEL IGSIDFLNLS EEEVFRFNFA  120
DVNIAFEFYQ QYAKHHGFGA RRFRSEKHGE VRIRQEFVCH RQGYRSPKFY
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.TB2PX
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016168954.12e-87protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_025670570.12e-87protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445DJC82e-99A0A445DJC8_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1661226