PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.TE2KQ
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 221aa    MW: 25553.6 Da    PI: 5.0341
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.TE2KQgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR162.61.2e-1998202191
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..............tekerrtraetrtgCkaklkvkkek.dgkwevtklel 83 
                  +fYn+Y+   GF +rk++  +  ++g+i++r++vC+keg r+ ++                ++++r+ r+ trt+C a+l+vk+++  g+w+v+ +++
  Aradu.TE2KQ  98 QFYNAYSCWHGFVMRKDNAVRD-NQGRIISRQLVCNKEGWRNMRQLVcnkegwrnmryldmDDRSREARSLTRTKCPARLRVKLDYgCGRWKVSCFVE 194
                  6****************99988.8888****************99888999*********9999**********************99********** PP

         FAR1  84 eHnHelap 91 
                   Hn +l+p
  Aradu.TE2KQ 195 SHNYDLTP 202
                  ***99975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031014.6E-1798202IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    Send to blast
CVGLGKGHLP LTPTVHFLSV EAQPLLVIKD DVKNDSDNDL GDDFDYQPNA EDDAEDDDVD  60
SLDSTSKSEE VCGVKRIADL MVEDIWNLEF RTEDEACQFY NAYSCWHGFV MRKDNAVRDN  120
QGRIISRQLV CNKEGWRNMR QLVCNKEGWR NMRYLDMDDR SREARSLTRT KCPARLRVKL  180
DYGCGRWKVS CFVESHNYDL TPPQFAHLVP ANRRLTVTDR V
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.TE2KQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371771e-149HQ637177.1 Arachis hypogaea clone AHF-303L13 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015965951.11e-120protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445D7E11e-118A0A445D7E1_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9653634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.17e-17FAR1-related sequence 5