PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.TG0QF

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

Nin-like

Protein Properties

Length: 408aa MW: 44980.3 Da PI: 11.0924

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.TG0QF	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	36.1	1.3e-11	2	30	24	52
RWP-RK 24 eLgvclTvLKriCRqyGIkRWPhRkiksl 52 +++++lT+ Kr+C ++ I+ WPhRkiksl Aradu.TG0QF 2 KMNIGLTLFKRRCKELSINHWPHRKIKSL 30 69*************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	10.91	1	51	IPR003035	RWP-RK domain
Pfam	PF02042	1.0E-8	2	30	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence Send to blast
MKMNIGLTLF KRRCKELSIN HWPHRKIKSL HLLVQNLKET ALDNKSWSVG ARNKDVGESS 60 RNGTHIRDKE TKASFLENWM PLKPSLTPSS SPISPTERSI LTARKGVEGN REGISGGGKG 120 VATTPRCRTT TPHRQTYPTV ATNVDEKRWL VSEKVAGLEP TSWRRGIGER QNSHLVAAVH 180 GASSCITVTR RREKMLAGGA ASSRHCCTTD RHRSIIALNE THKEEPDVRE EEGERSEADM 240 VSATAVYLRH CRTAPLRCLV GASVTVAGDL WLLENTAIVA TEGGRSIAAV LTARHSLVVT 300 RTTAGDATTW LSHFLLVVPP PLFHKHTRSP VKEKKERRAR RGERDPEGGR GSPPRLAAGG 360 RARSEAELRS NHRVRSLSRY QHRRDLQPVC SVVGKLVAVG VSPSLSLL

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence Send to blast

MKMNIGLTLF KRRCKELSIN HWPHRKIKSL HLLVQNLKET ALDNKSWSVG ARNKDVGESS  60
RNGTHIRDKE TKASFLENWM PLKPSLTPSS SPISPTERSI LTARKGVEGN REGISGGGKG  120
VATTPRCRTT TPHRQTYPTV ATNVDEKRWL VSEKVAGLEP TSWRRGIGER QNSHLVAAVH  180
GASSCITVTR RREKMLAGGA ASSRHCCTTD RHRSIIALNE THKEEPDVRE EEGERSEADM  240
VSATAVYLRH CRTAPLRCLV GASVTVAGDL WLLENTAIVA TEGGRSIAAV LTARHSLVVT  300
RTTAGDATTW LSHFLLVVPP PLFHKHTRSP VKEKKERRAR RGERDPEGGR GSPPRLAAGG  360
RARSEAELRS NHRVRSLSRY QHRRDLQPVC SVVGKLVAVG VSPSLSLL

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.TG0QF

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G74480.1	2e-10	RWP-RK domain-containing protein