PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.U3FYE

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 373aa MW: 43527.8 Da PI: 10.0648

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.U3FYE	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	49.3	1.7e-15	35	119	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 kfY++Y+k +GFs+++++++++ +ei+++ vCs+egk +++ + +t++ ++C a++ v+ k + w + k++l+H+H+ Aradu.U3FYE 35 KFYKSYSKLAGFSTKIRNTTRK--GDEIKNQLIVCSREGKWKSKIFP---TLKTNPLAGINCPARIYVHILKdVSFWTIFKVVLNHSHPY 119 6**************98776..899***********99877...999************98879************85 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	1.2E-12	35	119	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence Send to blast
MRAPIPPLIN SRFVVDEQFV PKVGMTFMTL EKARKFYKSY SKLAGFSTKI RNTTRKGDEI 60 KNQLIVCSRE GKWKSKIFPT LKTNPLAGIN CPARIYVHIL KDVSFWTIFK VVLNHSHPYY 120 PDRAEMLKQH RELSMFVRRT IENNEEAEIR PSKTYQSFVY DNCLASKEQK EREFDAADFY 180 TGIPCTTKSV IEAQFQHVYT HEKFNKVQAQ FRGNVNRITR SMHSTIGFTT YEVVEQVSNS 240 TFNKFFCLLF ESRGKLCRYS LNILSFERVD KSKNIKRTHT HVKCSQHEPL LEPRSKRFDD 300 LVFRSHNICK FASESEELTG ILHRVANATK KKKKPAPSEL NLLDNGSTIQ SSSNLYNAQD 360 MNYPKEDYRS FNF

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence Send to blast

MRAPIPPLIN SRFVVDEQFV PKVGMTFMTL EKARKFYKSY SKLAGFSTKI RNTTRKGDEI  60
KNQLIVCSRE GKWKSKIFPT LKTNPLAGIN CPARIYVHIL KDVSFWTIFK VVLNHSHPYY  120
PDRAEMLKQH RELSMFVRRT IENNEEAEIR PSKTYQSFVY DNCLASKEQK EREFDAADFY  180
TGIPCTTKSV IEAQFQHVYT HEKFNKVQAQ FRGNVNRITR SMHSTIGFTT YEVVEQVSNS  240
TFNKFFCLLF ESRGKLCRYS LNILSFERVD KSKNIKRTHT HVKCSQHEPL LEPRSKRFDD  300
LVFRSHNICK FASESEELTG ILHRVANATK KKKKPAPSEL NLLDNGSTIQ SSSNLYNAQD  360
MNYPKEDYRS FNF

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.U3FYE

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015960283.1	1e-120	protein FAR1-RELATED SEQUENCE 6-like
TrEMBL	A0A444XSH0	1e-166	A0A444XSH0_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21	14	477

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-07	FAR1-related sequence 5