PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.U4ABC
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 335aa    MW: 37951 Da    PI: 6.9117
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.U4ABCgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.31.2e-12124167855
                  HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                   Er RR+++++ f++L  +lP++     +K +K++i+ +Av++Ik Lq
  Aradu.U4ABC 124 TERERRKKMRDMFANLHAMLPQL----PPKADKSSIVDEAVRHIKTLQ 167
                  6*********************6....39******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.535116166IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.33E-15119185IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.9E-14121182IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.69E-12121171No hitNo description
PfamPF000105.0E-10124167IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.1E-8124172IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    Send to blast
KFLTITLSLS PPTHIDTLSS LSLTMAMSVE NQDPNDIGFF WDNQPWDVSN FDNLGQRETK  60
ENLHIEMPPL PPAPINHLTQ GEIEKKNEEF TTPVTNNKKR RRADEDGKRP MKNDGNDHDL  120
HIWTERERRK KMRDMFANLH AMLPQLPPKA DKSSIVDEAV RHIKTLQQTV ENLEKKKRQR  180
IQSLSVSVSP IVCESAVTDP QWNPYDSSSL SRDNNALTIT GTQHASNPSF VSAAVANNSP  240
FFKTWASQNV VLNMCGEEAQ FSICAEKKPS LFTTIAFVLQ KHKVDVISAS ILCNHNVNRY  300
MVLTHASRAL LQFADANTVE ETFKRAAEEI MMWLG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1174179KKKRQR
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.U4ABC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015944861.10.0transcription factor bHLH95
TrEMBLA0A445B6T80.0A0A445B6T8_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47733358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.12e-48bHLH family protein