PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.U5XVR

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 90aa MW: 10282.8 Da PI: 10.5129

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.U5XVR	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	25.2	5.5e-08	27	71	1	47
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47 kfY++Y+k +GFs++++++++ ++i+++ vC+ eg+ +++ + Aradu.U5XVR 27 KFYKHYSKLAGFSTKIRNTTRD--RDKIKNQLIVCTGEGRWKSKISP 71 6**************98887..5669*********98877654 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	4.3E-5	27	71	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 90 aa Download sequence Send to blast
MNDSTSNQLN DKDLVGMIFK TLEEARKFYK HYSKLAGFST KIRNTTRDRD KIKNQLIVCT 60 GEGRWKSKIS PTLKTNPSAG LNYPAKIYVP

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.U5XVR

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016172294.1	3e-44	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A445EVC4	7e-45	A0A445EVC4_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21	14	477