PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.U9E9K
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 214aa    MW: 24922.6 Da    PI: 8.9231
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.U9E9KgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR153.29.9e-179792391
         FAR1 23 krngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91
                 +++g+i++r++vC+keg r+ +  + ++++r+ r+ trt+C a+l+vk+++  g+w+v+ +++ HnH+l+p
  Aradu.U9E9K  9 DNQGRIISRQLVCNKEGWRNMRYLDmDDRSREARSLTRTKCPARLRVKLDYgCGRWKVSCFVESHNHDLTP 79
                 57899***************9998867889999******************99***************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.4E-14979IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    Send to blast
MRKDDVVRDN QGRIISRQLV CNKEGWRNMR YLDMDDRSRE ARSLTRTKCP ARLRVKLDYG  60
CGRWKVSCFV ESHNHDLTPP QFAHLVPANR RLTVTDRVQV ENLHNFGVKS CHIMGFYVNR  120
KNTLIDFMHN LDRALKEYRS NELIADFKSQ CSEPVMIISL EVYERSVSCY FTRNIFKEIC  180
NEIQRAGALN ITVLSTTLDK VEFSVTALGD PTKD
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.U9E9K
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371771e-150HQ637177.1 Arachis hypogaea clone AHF-303L13 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015940844.12e-81protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445ENQ21e-129A0A445ENQ2_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF845424
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.17e-18FAR1-related sequence 5