PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.UA4JV
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family TALE
Protein Properties Length: 549aa    MW: 59308.7 Da    PI: 7.631
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.UA4JVgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox29.81e-093393761954
                  HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
     Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                  Fe   ++yp+ +++  LAk++gLt +qV++WF N R +
  Aradu.UA4JV 339 FEHflHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVR 376
                  664459******************************88 PP
2BELL69.18.4e-23213271172
         BELL   1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                  erqe+q+kkakL+++l+e+             vissFe++ag+gsa+ Yt+lAl++iS++FrcLkdai++qi
  Aradu.UA4JV 213 ERQEIQMKKAKLITMLDEI-------------VISSFEQAAGIGSARTYTALALQTISKQFRCLKDAITGQI 271
                  79***************85.............***************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005745.3E-42155269IPR006563POX domain
PfamPF075269.5E-29160268IPR006563POX domain
PROSITE profilePS5007112.195317380IPR001356Homeobox domain
CDDcd000863.96E-12320381No hitNo description
SMARTSM003895.3E-9320384IPR001356Homeobox domain
SuperFamilySSF466894.71E-17321387IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.607.3E-29323386IPR009057Homeodomain-like
PfamPF059202.1E-18337376IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 549 aa     Download sequence    Send to blast
MATYFHGNSE IQGGGVDGGL QTLVLMNPGY IQFSDTPPPP PPHGGNLMLL NSLAAAGNSS  60
LASHAPLSQQ FLGVPLAAEH MHGHHDVSVA LHGYAPRGHY NLWNTIDPTT AARDATRATQ  120
GLSLSLPAMS GDDVRVSGGS PSSASGVTNG GGGVSGIQSV LLNSKYLRAT QELLEEVAKV  180
GVGESSSNGG NSGGDGSVGE GSEKRCAELS TTERQEIQMK KAKLITMLDE IVISSFEQAA  240
GIGSARTYTA LALQTISKQF RCLKDAITGQ IKAANKSLGE EDYFGGGGGK IEGSRLKYVD  300
HHLRQQRAIQ QLGMMHHNAW RPQRGLPERS VSVLRAWLFE HFLHPYPKDS DKHMLAKQTG  360
LTRSQVSNWF INARVRLWKP MVEEMYLEEM KDHDMNNSNN NNVSEDNKSS KSNEDPNNAK  420
NSPPRDSNSE SDTKKSFNSK QENVSISTPT SQIGGNSRNN NNNNSSGFSF MGSSELLDGI  480
TQGSSPKKPR SNEINIQLGR RLDRMSGEQH SNEFGAVNNT QNPHHSSAAF QSMQNSKRFA  540
AQLLPDYVA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrs_A9e-17326383158Homeobox protein Meis1
4xrs_B9e-17326383158Homeobox protein Meis1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.UA4JV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015951375.10.0BEL1-like homeodomain protein 1
RefseqXP_015951376.10.0BEL1-like homeodomain protein 1
RefseqXP_015951378.10.0BEL1-like homeodomain protein 1
RefseqXP_015951379.10.0BEL1-like homeodomain protein 1
RefseqXP_020991824.10.0BEL1-like homeodomain protein 1
TrEMBLV7D1A00.0V7D1A0_PHAVU; Uncharacterized protein
STRINGXP_007162972.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF16273492
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35940.31e-106BEL1-like homeodomain 1