PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.UH16H
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB_related
Protein Properties Length: 205aa    MW: 22996.5 Da    PI: 8.8457
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.UH16HgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.91.1e-1360107148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwqkyl 48 
                      +grWT eEd++l ++++    g+W++ ++ +g + R++k+c++rw +yl
      Aradu.UH16H  60 KGRWTNEEDQILTNYIQAIEEGSWRALPKNVGfL-RCGKSCRLRWINYL 107
                      79******************************55.************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129416.82955111IPR017930Myb domain
Gene3DG3DSA:1.10.10.604.4E-1856110IPR009057Homeodomain-like
SMARTSM007173.3E-1059109IPR001005SANT/Myb domain
PfamPF002494.8E-1360107IPR001005SANT/Myb domain
SuperFamilySSF466898.97E-1961134IPR009057Homeodomain-like
CDDcd001673.03E-862107No hitNo description
Gene3DG3DSA:1.10.10.609.7E-6111134IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    Send to blast
MQNLCCHLEC SKEVTSKFQE IVPLIAGNIF GTEDNGPARK WIALVNKTLN SLIGTRGLKK  60
GRWTNEEDQI LTNYIQAIEE GSWRALPKNV GFLRCGKSCR LRWINYLRAD LKRGNISIEE  120
EAIITKLHAS FGNRNMIPSN FTMNTSNVMA SLATDLLIIG YSNTDVAEYL YNSKPDADSL  180
YKYLCKDLTK ACSTKSPPVP KVVTI
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.UH16H
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A445ESK91e-110A0A445ESK9_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3134817
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47460.14e-39myb domain protein 12