PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.UKT13
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 654aa    MW: 72883.2 Da    PI: 8.6387
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.UKT13genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR161.52.6e-19191281291
         FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                   Y ++Ak +GF vrk  s k+ ++g+i+++ f+C+++g re+++ +  +++r ++aetrt+C ak +v ++  + kw+ +++  +HnH+lap
  Aradu.UKT13 191 AYVAFAKATGFAVRKGDSVKN-EEGNIVRKFFYCNRQGLREKKHYErVDRKRAHKAETRTNCYAKYVVYLDMsSRKWRTKTFIVDHNHDLAP 281
                  599****************99.7778***************99988567788899*************99988****************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.0E-17191281IPR004330FAR1 DNA binding domain
PROSITE profilePS509669.557435471IPR007527Zinc finger, SWIM-type
SMARTSM005757.6E-4446473IPR006564Zinc finger, PMZ-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 654 aa     Download sequence    Send to blast
MKKEGKGGEM RAVLLKTHRK VASGATRKKE GEPNSVEGMD RKNARRNCKE FSDAVGSSSG  60
NTKIQPLLRR SRSATFAAVW VAIDAEAAFD LSHGEGSSDF SVQWTDGWST DSTDDDEGSA  120
ARSLETEEVQ SAAGDREDGS VAGDEGSMPV PTGIHVAADT EYGDEELGSA VLTTAALESA  180
EYNSVEEVYK AYVAFAKATG FAVRKGDSVK NEEGNIVRKF FYCNRQGLRE KKHYERVDRK  240
RAHKAETRTN CYAKYVVYLD MSSRKWRTKT FIVDHNHDLA PPDFTNVMAP HRKLTDGDKA  300
HIHSMHEAGF QTTQIMGFFA HLCGGYRNGI NSSLKKFIKS GNCLLELVEN LDRVVKDYRN  360
NEFIADYKSL YTDPVLTTGL ESLERSASKL YTREIFFEVK KQIESVGGMI VLHKDRFGST  420
EKFMLRKFRK PHRVHAVLYD RGSDKFECSC KLWNTVGIPC GHIFCVLKEL DVEELPDRLV  480
LKRWRKNAKS DRISTIEVQS DPDRAIRVRY GALWAACSKM CFLGAQGSET YKEVVNVVTK  540
TSNELESMCY IGNKGGQAHP AGNDIDIGNP HIIRSKGASR GSTHVKNGRR CRRNQFPGRG  600
EATAVAGKGA GIHSICNNAN QCGVVGNEVK VIMFTAHLER HLVLFDRDFA EFFA
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.UKT13
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015945803.10.0protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_025625587.10.0protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445DVN50.0A0A445DVN5_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1663528
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.16e-20FAR1-related sequence 5