PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.UZ98K
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 270aa    MW: 30477.1 Da    PI: 9.2585
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.UZ98KgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR157.54.6e-18148234191
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                  kfY++YAk +GFs+r++ ++++   +ei+++  +Cs+egk +++ +    +++t+++   +C a++ ++  k  g w ++k++l+H+H+++p
  Aradu.UZ98K 148 KFYRNYAKAAGFSTRVRCTNRK--GNEIKNQLITCSREGKWKSKISP---TEKTNPTAGLNCPARIYIHTLKdVGAWIISKVVLDHSHSCCP 234
                  6***************998776..8889*************998877...8999**************998879**************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.4E-15148234IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    Send to blast
NTRSSTYVDY TRYIISRVYL TSKFKIFVSF FVFVILRFGC SSSRASSLIL LHRSFPLLFS  60
LVCSSFTLSF SLSATRASFS LLICCFLKSK FELVLKIMDP SSSDCVLNPG DVDYEFESNE  120
VPEPLSVVDD ELVPKVGMTF TTLEDAGKFY RNYAKAAGFS TRVRCTNRKG NEIKNQLITC  180
SREGKWKSKI SPTEKTNPTA GLNCPARIYI HTLKDVGAWI ISKVVLDHSH SCCPSKAEML  240
KQHRELSMSI RRTIENNDEA GIRPSKTYQS
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.UZ98K
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371780.0HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020992539.11e-130protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445D2831e-125A0A445D283_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.23e-11FAR1 family protein