PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.UZL3H
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 181aa    MW: 20619.8 Da    PI: 10.0397
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.UZL3HgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR158.32.5e-1861147191
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                  kfY++YAk +GFs+r++ ++++   +ei+++  +Cs+egk +++ +    +++t+++   +C a++ ++  k  g w ++k++l+H+H+++p
  Aradu.UZL3H  61 KFYRNYAKAAGFSTRVRCTNRK--GNEIKNQLITCSREGKWKSKISP---TEKTNPTAGLNCLARIYIHTLKdVGAWIISKVVLDHSHPCCP 147
                  6***************998776..8889*************998877...8999**************998879***************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.3E-1561147IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    Send to blast
MNLNLTKFLR CSGVDQFFFG RILARSVGVY YIRHDWPVSV VDDEFVPKVG MTFTTLEDAG  60
KFYRNYAKAA GFSTRVRCTN RKGNEIKNQL ITCSREGKWK SKISPTEKTN PTAGLNCLAR  120
IYIHTLKDVG AWIISKVVLD HSHPCCPSKA EMPKQHRELS MSIRRTIENN EEAGIKPSKT  180
Y
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.UZL3H
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371780.0HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020997160.11e-99protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_020997362.17e-99protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445AIM31e-104A0A445AIM3_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76320.19e-11FAR1-related sequence 4