PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.V2836
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 97aa    MW: 11046.9 Da    PI: 10.383
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.V2836genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR122.92.9e-0729695291
         FAR1 52 rrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91
                 ++t+++   +C a++ ++  k  g w ++k++l+H+H+++p
  Aradu.V2836 29 EKTNPTAGLNCPARIYIHTLKdVGAWIISKVVLHHSHPCCP 69
                 678999999********998879***************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031015.0E-52969IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 97 aa     Download sequence    Send to blast
MTSLFPKFYK DYAKAVDFST RKSKISLTEK TNPTAGLNCP ARIYIHTLKD VGAWIISKVV  60
LHHSHPCCPT QAEMLKQHRK LSMSVRRTIE NNKEAGM
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.V2836
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371785e-79HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020979233.11e-49protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445BMS32e-64A0A445BMS3_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76320.15e-07FAR1-related sequence 4