PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.V37F6

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

bZIP

Protein Properties

Length: 168aa MW: 19345.8 Da PI: 7.7378

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.V37F6	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	37	7.2e-12	27	85	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++ +rkq+NRe+ArrsR RK+ ++ L +v +L +e ++ k ++ ++++ ++s++ Aradu.V37F6 27 RKKKRKQSNRESARRSRMRKQNHMDDLMSEVCKLGKEKSEILKGIDITTQQYLCVESQN 85 6899**********************************999999988888877666665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	4.3E-18	23	87	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	2.4E-10	25	73	No hit	No description
PROSITE profile	PS50217	10.048	25	88	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	5.94E-11	27	81	No hit	No description
Pfam	PF00170	5.1E-9	27	71	IPR004827	Basic-leucine zipper domain
CDD	cd14702	6.58E-16	28	78	No hit	No description
PROSITE pattern	PS00036	0	30	45	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 168 aa Download sequence Send to blast
MASSSGNSTL QSSGSEEDML LMMMDERKKK RKQSNRESAR RSRMRKQNHM DDLMSEVCKL 60 GKEKSEILKG IDITTQQYLC VESQNSILRA QLEELSQRLQ SLNHIVHLIN TTPPNLPFHH 120 HHTQTQYDYL LPPTPAAENF FSNNMNMFNH INQPISASAA ADIYQWVN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	39	46	RRSRMRKQ

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269\|PubMed:23461773}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.V37F6

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015933888.1	1e-124	bZIP transcription factor 11-like
Refseq	XP_025612215.1	1e-124	bZIP transcription factor 11
Swissprot	C0Z2L5	7e-39	BZP44_ARATH; bZIP transcription factor 44
TrEMBL	A0A445BR35	1e-123	A0A445BR35_ARAHY; Uncharacterized protein
STRING	XP_004499193.1	2e-45	(Cicer arietinum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF613	34	147

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75390.1	2e-20	basic leucine-zipper 44

Publications ? help Back to Top
Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470] Pedrotti L, et al. Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness. Plant Cell, 2018. 30(2): p. 495-509 [PMID:29348240]