PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.V4TBZ
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family B3
Protein Properties Length: 122aa    MW: 14060.7 Da    PI: 9.9112
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.V4TBZgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.71.5e-11541022673
                  T...---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT CS
           B3  26 h...ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkang 73 
                      +++++  ++l+ +d +g +W++k+iyr+++++y+l+ GW+ Fv + +
  Aradu.V4TBZ  54 KdmtMKNPT--QELVAKDIHGVEWKFKYIYRGHPKSYLLSIGWSAFVGQER 102
                  244444444..48**********************************8766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF023625.9E-954108IPR003340B3 DNA binding domain
SuperFamilySSF1019362.35E-105498IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.105.0E-1255102IPR015300DNA-binding pseudobarrel domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 122 aa     Download sequence    Send to blast
MLQFLSMGCS LMRWFLSPPL PYIMISGFSL HLIARTRIEN LVNFVLSAKM KSSKDMTMKN  60
PTQELVAKDI HGVEWKFKYI YRGHPKSYLL SIGWSAFVGQ ERNKVVVQVT LKEVDGVECI  120
VY
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.V4TBZ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A445ERC32e-44A0A445ERC3_ARAHY; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46530.22e-18auxin response factor 11