PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.V94FJ
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB_related
Protein Properties Length: 541aa    MW: 61014.2 Da    PI: 5.8203
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.V94FJgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.52.6e-07476527447
                      S-HHHHHHHHHHHHHTTTT....-HHHHHHHHT....TTS-HHHHHHHHHHH CS
  Myb_DNA-binding   4 WTteEdellvdavkqlGgg....tWktIartmg....kgRtlkqcksrwqky 47 
                      WT+eE+++l ++v ++ ++     W++I +       k+R++ ++k++w++ 
      Aradu.V94FJ 476 WTAEEEKILQEGVLRFSKEnqriPWNRILEFGRhvfdKTRSPIDLKDKWRNI 527
                      *****************99**********9998*****************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF579036.42E-7119174IPR011011Zinc finger, FYVE/PHD-type
Gene3DG3DSA:3.30.40.101.3E-7120170IPR013083Zinc finger, RING/FYVE/PHD-type
PROSITE patternPS013590123166IPR019786Zinc finger, PHD-type, conserved site
SMARTSM007170.0073472530IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.605.7E-6475529IPR009057Homeodomain-like
SuperFamilySSF466892.04E-8476532IPR009057Homeodomain-like
PROSITE profilePS500906.47476528IPR017877Myb-like domain
CDDcd116601.46E-10476529No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009751Biological Processresponse to salicylic acid
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 541 aa     Download sequence    Send to blast
MRIKTRGGRR RLSCSADPPS PITKQDEYVA AELEISHGGG GDDAKDAPMV DCIDQHYNEN  60
HLDVLNHEQD KNCATEFETS HGGGDDDNVK DVLTVECIDQ HYNENPLDIL DHEDIDFLDK  120
SICLCCNKRG GVLVCSGSGC PVGLHPKCIN SEPKFDDLGK FYCPYCWYSR NVNMNPELKE  180
RIFSAKNALL GLSDKDVVMN DRLVKTKSAD KRKEPDDGGG IPLSSDGRQG TDEVGAQLLQ  240
PKVDLPIKLQ KDASVQCDIA LEDQAYSDGD FRSCGEEVMP VDINLVEGSL DQDKFDRPGK  300
VEKSLELKES FETGNSRLNK EDVHERIING REEGGHLDAL HLGKHIEGHS KDIAFAQGTQ  360
ESSVKSGDKG RKTGKEKIPL KENEESAIGS SVNETNNSDS DAISGRSCCS KRKIQKTEYP  420
QDVYKKPLLQ GNNFKEEKGS DINEEVTSCR FRRRSQSSQK QEIKKFPLAR RNMLIWTAEE  480
EKILQEGVLR FSKENQRIPW NRILEFGRHV FDKTRSPIDL KDKWRNIKKG SFRYFQIYQK  540
I
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.V94FJ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015971788.10.0uncharacterized protein LOC107495194
TrEMBLA0A445CVH90.0A0A445CVH9_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF120552022