PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.VDI9P
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family GeBP
Protein Properties Length: 428aa    MW: 46941.9 Da    PI: 4.5061
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.VDI9PgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF5731201.2e-37114209297
       DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
                  lfqrlw++eDei lLqG++++++++g+s ++d+  fy+++k++++++++k+qlveKirrLKkK+++  +k+ sgke++f+++hdq +fe+s+kiW 
  Aradu.VDI9P 114 LFQRLWTDEDEIELLQGFLEYTSQRGSSHHNDTALFYDQIKSKLQLDFNKNQLVEKIRRLKKKYRNVLNKIGSGKEFNFKSAHDQATFEISRKIWS 209
                  79*********************************************************************************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045045.8E-35115209IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 428 aa     Download sequence    Send to blast
MMASEQHDTV FPEEDMDEDD EESQEDEEEE DIDDDDVLPD DEENEPSPST SSAALAVTVA  60
VPSSVIPNGE KAPISTPTAN AATTVVVALE GSSSDPKRQQ QIEEKKPLDD SRRLFQRLWT  120
DEDEIELLQG FLEYTSQRGS SHHNDTALFY DQIKSKLQLD FNKNQLVEKI RRLKKKYRNV  180
LNKIGSGKEF NFKSAHDQAT FEISRKIWSN LGPVADNALD DDEINLNPIP NPNPNLNFTF  240
ALPAPRTETL FGNSSEKKTP PSRKRSRPRS SAATTVKIEE RRESMDGSAS HKEHNFNLNA  300
AATGLPATPN NNCESNKCSG GYGIPGLVEE TVRSCLSPLV KELVGGAAMG GGHFGGRGFG  360
GGGFSLNPIP LGFGAMNNLG LGLGGGELVD ERWRKQQILE LEVYSKRLEL VQEQIKAALE  420
ELRSTAGS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1354362GGRGFGGGG
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.VDI9P
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015968523.10.0probable transcription factor At3g04930
RefseqXP_025603590.10.0probable transcription factor At3g04930
TrEMBLA0A444YKD70.0A0A444YKD7_ARAHY; Uncharacterized protein
STRINGGLYMA19G43180.11e-153(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32553365
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.13e-71DNA-binding storekeeper protein-related transcriptional regulator