PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.VS58Y
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 181aa    MW: 20831 Da    PI: 9.6064
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.VS58YgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.34.1e-111567255
                 HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  2 rrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                 r+  + +Er RR++++  +++L +llP+     + +  s  + Le+A++YIk+Lq
  Aradu.VS58Y 15 RTERKFIERERRNQMKALYSNLNSLLPPqT--SREGISSLPDQLEEATNYIKKLQ 67
                 6777889*********************55..69999*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.20E-51371No hitNo description
PROSITE profilePS5088810.8741366IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.53E-111489IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.0E-91570IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-71567IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.00791972IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0050832Biological Processdefense response to fungus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    Send to blast
MEKKHHPGGS TCSTRTERKF IERERRNQMK ALYSNLNSLL PPQTSREGIS SLPDQLEEAT  60
NYIKKLQVKL EKMKEKKNTL LRTIHHQIPN NRSPQIEIQQ MGFTLMVVLI TALDSHYFMF  120
IEAIRVLHEE GADVVSASYK VVQHAVFHTM HCQVGEYGNG AAARISERLK KFVNDSTYCP  180
F
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.VS58Y
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015942983.11e-135transcription factor bHLH162
SwissprotF4JIJ71e-43BH162_ARATH; Transcription factor bHLH162
TrEMBLA0A445BBH71e-129A0A445BBH7_ARAHY; Uncharacterized protein
STRINGGLYMA13G31211.16e-68(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9063498
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.15e-46bHLH family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]