PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.VWV0Y
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family G2-like
Protein Properties Length: 436aa    MW: 47906.1 Da    PI: 6.5099
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.VWV0YgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like51.52.2e-162632932656
      G2-like  26 kAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                   AtPk+i+elmkv+gLt+++vkSHLQkYRl+
  Aradu.VWV0Y 263 LATPKQIRELMKVDGLTNDEVKSHLQKYRLH 293
                  49***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466894.12E-9249296IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.1E-13251296IPR009057Homeodomain-like
TIGRFAMsTIGR015571.5E-13262293IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009266Biological Processresponse to temperature stimulus
GO:0009740Biological Processgibberellic acid mediated signaling pathway
GO:0010452Biological Processhistone H3-K36 methylation
GO:0048579Biological Processnegative regulation of long-day photoperiodism, flowering
GO:1903507Biological Processnegative regulation of nucleic acid-templated transcription
GO:0005634Cellular Componentnucleus
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 436 aa     Download sequence    Send to blast
MASPSELSLD CKPHSYSMLL KSFGDHNNSN SNDQEQNQSY KIEEFLSRLE EERLKIDAFK  60
RELPLCMQLL TNAMEASRQQ LQAFNQGTTR PVLEEFIPIK HSEISEKEAP SSMNMMMSDN  120
KANWMTSAQL WSQSSQEVTT RAATPPPSKD ADNNNNIGFM SMSPNKHRNG GSGGAFLPFS  180
KERRNNNNNS CALGGELALA SPDKEMLIMD DDNNNNNNKR DHSSSNDQGK GTTTSSATPP  240
PSNTTTSQTH RKARRCWSPD LHLATPKQIR ELMKVDGLTN DEVKSHLQKY RLHTRRPSPS  300
PQPGAPAPQL VVLGGIWVPP EYATAAGAPA AIYGTHHPAS HAPPPHYCAA TPMPQEFYTA  360
APPQPLLPPP PPPHHLHMYK AAGQNSSPES EVGGCGERSE SIEDGKSESS SWKGESEGER  420
KGLNEESNCS DITLKF
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor acting as a flowering repressor, directly repressing FT expression in a dosage-dependent manner in the leaf vasculature. {ECO:0000269|PubMed:25132385}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00261DAPTransfer from AT2G03500Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.VWV0Y
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated by SVP. Down-regulated by high temperature and gibberellic acid treatment. Not regulated by photoperiod, circadian rhythm under long days or vernalization. {ECO:0000269|PubMed:25132385}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015944433.10.0myb family transcription factor EFM
SwissprotQ9ZQ851e-102EFM_ARATH; Myb family transcription factor EFM
TrEMBLA0A444WXE80.0A0A444WXE8_ARAHY; Uncharacterized protein
STRINGGLYMA05G08150.11e-164(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54663455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03500.13e-69G2-like family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]