PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.VX7C5

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

EIL

Protein Properties

Length: 126aa MW: 14537.8 Da PI: 7.5055

Description

EIL family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.VX7C5	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	EIN3	141.7	1.1e-43	1	124	60	198
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS CS EIN3 60 MlkemevcnaqGfvYgiipekgkpvegasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdp 157 M+k+mevc+a+G +sdsLr+WWke+++f++++p i+ky + +l++++ ++ss+ h l++lqD+tlgSLLsalmq c+p Aradu.VX7C5 1 MVKIMEVCKARGKA----------NYCSSDSLREWWKEDIRFEQTAPKTIAKYLP---LLEKGEL---DASSSIHLLQDLQDATLGSLLSALMQYCMP 82 78888888888655..........67789**********************33...4454444...479*********************** PP -TTS--TTT--HHHH---S--HHHHHHT.--TT--.-----G CS EIN3 158 pqrrfplekgvepPWWPtGkelwwgelg.lskdqgtppykkp 198 pqrr+ lekg +pPWWP+G e wwg +g l++++g +++p Aradu.VX7C5 83 PQRRYLLEKGAAPPWWPNGLEVWWGDQGfLAQEHGHHRIRNP 124 **************************99999999999988 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04873	1.3E-45	1	124	No hit	No description
Gene3D	G3DSA:1.10.3180.10	1.0E-26	55	115	IPR023278	Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamily	SSF116768	8.76E-24	58	113	IPR023278	Ethylene insensitive 3-like protein, DNA-binding domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 126 aa Download sequence Send to blast
MVKIMEVCKA RGKANYCSSD SLREWWKEDI RFEQTAPKTI AKYLPLLEKG ELDASSSIHL 60 LQDLQDATLG SLLSALMQYC MPPQRRYLLE KGAAPPWWPN GLEVWWGDQG FLAQEHGHHR 120 IRNPMI

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
4zds_A	5e-22	56	124	1	68	Protein ETHYLENE INSENSITIVE 3
4zds_B	5e-22	56	124	1	68	Protein ETHYLENE INSENSITIVE 3
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Functional Description ? help Back to Top
Source	Description
UniProt	Putative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.VX7C5

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020988768.1	3e-72	LOW QUALITY PROTEIN: ETHYLENE INSENSITIVE 3-like 5 protein
Swissprot	Q9FJQ5	7e-45	EIL5_ARATH; ETHYLENE INSENSITIVE 3-like 5 protein
TrEMBL	A0A4D6ME96	5e-51	A0A4D6ME96_VIGUN; Ethylene-insensitive protein 3
TrEMBL	I1K4L0	7e-51	I1K4L0_SOYBN; Uncharacterized protein
STRING	GLYMA05G31410.1	1e-51	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF322	34	200

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65100.1	3e-47	EIL family protein

Publications ? help Back to Top
Duarte JM, et al. Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546]