PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.W58GD
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family Dof
Protein Properties Length: 354aa    MW: 37490.4 Da    PI: 9.6217
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.W58GDgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof121.92.2e-3875134362
       zf-Dof   3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                  e a+kcprC+stntkfCy+nnyslsqPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+++
  Aradu.W58GD  75 EPAQKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRTK 134
                  56899****************************************************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074782.0E-2958123IPR003851Zinc finger, Dof-type
PfamPF027013.8E-3277132IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.31178132IPR003851Zinc finger, Dof-type
PROSITE patternPS01361080116IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    Send to blast
MVYTSIPAYI DPVNWHQQQQ PNHQQNNTGG TSSQLLHPPP PPLPPSTQQH GASTSSIRPG  60
SMADRARMAN IPMQEPAQKC PRCESTNTKF CYFNNYSLSQ PRHFCKTCRR YWTRGGALRN  120
VPVGGGCRRN KRTKGTTTSN NGSKSPPPSS DRGGPTVSGG SFASEIAGLS PPVPSSLRFM  180
APLMHHQQLG DHFSGVGGGD LGLNYAAISG PMGGMGDLNF HIGSALRSDV TGGGNGGSSL  240
LSAAGLEQWR VPQTQQFSFL TGFEASSHGL YQFENSTSEG SGYGGGSSGG GGAIRPNKVS  300
TFASVVKMEE SNNNLPRQFL GMNNNSSSNS EHFVPASWTH LSGFTSSNTT NNPP
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00295DAPTransfer from AT2G37590Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.W58GD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015960388.10.0dof zinc finger protein DOF2.4-like isoform X1
RefseqXP_025695227.10.0dof zinc finger protein DOF2.4 isoform X1
TrEMBLA0A444WQI60.0A0A444WQI6_ARAHY; Uncharacterized protein
STRINGXP_004515618.11e-105(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF65634143
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G55370.15e-39OBF-binding protein 3