PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.WAT9N

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 247aa MW: 28816.3 Da PI: 8.3826

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.WAT9N	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	83.9	2.6e-26	80	170	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY+eYA++ GF vr++k ++s+ +++i++r+++C+keg++ + k++ + r++r++ r gC+a+++vk +k gkw+vtk+++eH+H+l+ Aradu.WAT9N 80 NFYDEYARQEGFIVRIDKCHRSEIDNRIISRRLTCNKEGFHVRGKNDkVNPYRKPRVSIREGCEAMMMVKVNKCGKWVVTKFVKEHSHPLM 170 6*************************************98877774678899*********************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	5.3E-25	80	170	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 247 aa Download sequence Send to blast
MNFRRLEPLI FSLMMLQLFQ EGICYLNNEL LIVIWLVELE AELVTANESS AEKTVGPCVG 60 ASILEPYIGM EFDSEADAKN FYDEYARQEG FIVRIDKCHR SEIDNRIISR RLTCNKEGFH 120 VRGKNDKVNP YRKPRVSIRE GCEAMMMVKV NKCGKWVVTK FVKEHSHPLM GSGVRSYRTT 180 ESKDKRIRQL TKELERRDQQ CQQYRKLILS LLETVEEQNK FLSTKVEQVV KCVKQLENDV 240 QKPLDTS

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.WAT9N

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015938944.1	1e-155	protein FAR1-RELATED SEQUENCE 5 isoform X1
Refseq	XP_025618210.1	1e-155	protein FAR1-RELATED SEQUENCE 5 isoform X1
TrEMBL	A0A444XDR6	1e-153	A0A444XDR6_ARAHY; Uncharacterized protein
STRING	GLYMA03G22670.2	6e-88	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF965	31	104

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43280.1	8e-51	FAR1 family protein