PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.WC8FK
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB_related
Protein Properties Length: 90aa    MW: 10296.1 Da    PI: 9.846
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.WC8FKgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.91.1e-132265548
                     -HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     ++ Ede+l+ +++++G g+W+++++  g+ R++k+c +rw +yl
      Aradu.WC8FK 22 SPKEDEKLLMYITKYGHGCWSSVPKQAGLQRSGKSCSLRWINYL 65
                     789***************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.0051369IPR017930Myb domain
SMARTSM007172.7E-61767IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.3E-182270IPR009057Homeodomain-like
SuperFamilySSF466891.5E-132274IPR009057Homeodomain-like
CDDcd001672.89E-92265No hitNo description
PfamPF002491.3E-112265IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 90 aa     Download sequence    Send to blast
MNNNGKTLLL LQAEASEGSM VSPKEDEKLL MYITKYGHGC WSSVPKQAGL QRSGKSCSLR  60
WINYLRPDLK FGIFLLLLFS LQPQFRYLLL
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.WC8FK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018453030.12e-28PREDICTED: transcription factor MYB86 isoform X2
SwissprotQ8LPH61e-25MYB86_ARATH; Transcription factor MYB86
TrEMBLA0A2I0HV643e-27A0A2I0HV64_PUNGR; Uncharacterized protein
TrEMBLD8RDI43e-27D8RDI4_SELML; Uncharacterized protein (Fragment)
STRINGEFJ297505e-28(Selaginella moellendorffii)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01680.38e-28myb domain protein 55