PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.WD82P
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 201aa    MW: 22984.5 Da    PI: 10.2626
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.WD82PgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.31.3e-135399354
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                 ++h+++E+rRR++iN  +++Lr+l+Pk+      K++Ka+ L  +v+++k+L
  Aradu.WD82P 53 KSHSQAEKRRREKINAQLATLRKLIPKS-----DKMDKAALLGSVVDHVKDL 99
                 79*************************8.....7****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.4595099IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.75E-1351103IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.7E-115399IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.9E-1553102IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.84E-1053102No hitNo description
SMARTSM003531.1E-1156105IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    Send to blast
MIIRLRNNNS SFSVPTQIVP HAYDSAFASL QFQYQWPLAF EGFPEDRAAS ASKSHSQAEK  60
RRREKINAQL ATLRKLIPKS DKMDKAALLG SVVDHVKDLK RKAMDVSKSI TVPSKTDEVT  120
IIECDPDQDE SYAKVKILKH NIVISVCCDD RPELFNELIQ VLKRIEETGT ESYRRMRRRA  180
RPVVLAAAVD GCGWRMRRRA R
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1173178RRMRRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.WD82P
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015966156.21e-114transcription factor TT8-like
TrEMBLA0A444YDJ01e-103A0A444YDJ0_ARAHY; Uncharacterized protein
STRINGXP_007163561.14e-72(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF57963351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.15e-28bHLH family protein