PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.WM3WA
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bZIP
Protein Properties Length: 409aa    MW: 45974.8 Da    PI: 7.2461
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.WM3WAgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_122.52.4e-072753211763
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1  17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                  A+rsR RK+++i+eLe+ v++L+ae  +   ele l+++   l +e+
  Aradu.WM3WA 275 AQRSRVRKLQYIAELERNVQALQAEGCEISAELEFLNQQNLILSMEN 321
                  89***********************************9998887776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0034264323IPR004827Basic-leucine zipper domain
CDDcd147035.56E-16266314No hitNo description
SuperFamilySSF579591.46E-5275317No hitNo description
Gene3DG3DSA:1.20.5.1702.7E-4275317No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 409 aa     Download sequence    Send to blast
RRIHLHFQSQ FVQSAWNHWL LACYLTGVGS ASMANSKGSS NYRNLMYPGK HALLPPKIPF  60
PSASQAYADY IPNLAVGSGQ KPREGNIQHH RTSSESLVIE EQPSWLDDLL NEPETPVRRG  120
VHRRSSSDSF AYVDTHNMSN ITYGDQDEYK YKNLLSFPSW SSQDFDHNKD AHHILMHAEM  180
NSAKQNIRSW DSFSNITNHP AGVLSGKDSV AFQGSGSLCP PPHEAEGLPS TANENHDAAE  240
SGIQDSKSSS EKKDGSHAKS SASETDTKRA KQQFAQRSRV RKLQYIAELE RNVQALQAEG  300
CEISAELEFL NQQNLILSME NKALKHRLES TAQEQLIKYL EQEVLEREIG RLRALYQQQQ  360
QLSHQPQQQP SASHRRTNSR DLESQFTNLS LKHKDSGSGH DPATGVLRI
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.WM3WA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015957695.10.0uncharacterized protein At4g06598
RefseqXP_015957696.10.0uncharacterized protein At4g06598
RefseqXP_020994967.10.0uncharacterized protein At4g06598
RefseqXP_025691000.10.0uncharacterized protein At4g06598
RefseqXP_025691001.10.0uncharacterized protein At4g06598
SwissprotQ8W3M75e-64Y4598_ARATH; Uncharacterized protein At4g06598
TrEMBLA0A444ZTY10.0A0A444ZTY1_ARAHY; Uncharacterized protein
STRINGGLYMA05G30170.30.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF51232637
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.21e-103bZIP family protein
Publications ? help Back to Top
  1. Kumekawa N,Hosouchi T,Tsuruoka H,Kotani H
    The size and sequence organization of the centromeric region of Arabidopsis thaliana chromosome 4.
    DNA Res., 2001. 8(6): p. 285-90
    [PMID:11853315]