PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.X05V0
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 137aa    MW: 15670 Da    PI: 8.1163
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.X05V0genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR136.61.5e-1150130185
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleH 85 
                  kfY++Y+k +GFs++++++++    ++i+++  vC++e + +++ +    + +t+++   +C  ++ v+ +k  g w ++k++l+ 
  Aradu.X05V0  50 KFYKHYSKLAGFSTKIRNTTRD--GDKIKNQLIVCTREERWKSKISP---TLKTNPSAGLNCLVRIYVHIMKdVGLWTISKVVLNY 130
                  6****************98776..8889**********998887766...999*****************9999*******99875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.8E-850133IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    Send to blast
MNESTSNQLN ECDLDNSSEM HQFDETSCVV DEKFVPKVGM IFKTLEEVGK FYKHYSKLAG  60
FSTKIRNTTR DGDKIKNQLI VCTREERWKS KISPTLKTNP SAGLNCLVRI YVHIMKDVGL  120
WTISKVVLNY SLPCCPD
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.X05V0
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016172294.15e-86protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444XC173e-85A0A444XC17_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477