PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.X1TYZ
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 345aa    MW: 38634.2 Da    PI: 9.3529
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.X1TYZgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.41.3e-13156203355
                  HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  + h ++Er+RR+++ ++f  L   +P +     +K +Ka+iL+ A++Y+k+Lq
  Aradu.X1TYZ 156 MDHIMAERKRRQELTERFIALSATIPGL-----TKTDKASILRAAIDYVKQLQ 203
                  5699***********************9.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.93E-13151207No hitNo description
PROSITE profilePS5088816.044153202IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.79E-18153219IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.7E-17157219IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.3E-11157203IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.7E-16159208IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    Send to blast
MLQPSFSSEN SESDNLQNTV GSSSSPVIEE VPQDLTAENS NNKNKKNNTM KQPRRSSSSS  60
SSLRCSSPRR YILSFDNSTM TPATPNQLQE DPYYANNNNN NNNNNNNHKN KKNKDPSSCD  120
YSSPKRVVPI CTNNSENKKE EGAITTKRAR SSSQTMDHIM AERKRRQELT ERFIALSATI  180
PGLTKTDKAS ILRAAIDYVK QLQEQVQELE KKNKKRSRES VILVKKSKSN NEKILLEEST  240
IISSETRRSE DGGTGLPDIE ARFMGKDVLI EIHCEKENGI EMKILNQLEN LHLFVTGSSV  300
LPFGNSALGI TIIAKMGDSC EMTVNDVVRN LRQVFLKAHQ NSHGI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1161166ERKRRQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.X1TYZ
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By ethylene (ACC) and jasmonic acid (JA) treatments. {ECO:0000269|PubMed:12679534}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015938220.10.0transcription factor NAI1-like
SwissprotQ9T0721e-48BH025_ARATH; Transcription factor bHLH25
TrEMBLI1KGX12e-95I1KGX1_SOYBN; Uncharacterized protein
STRINGGLYMA07G03060.13e-96(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF131101230
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.19e-42bHLH family protein