PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.X3GS1
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ERF
Protein Properties Length: 195aa    MW: 20769.4 Da    PI: 10.3084
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.X3GS1genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.83.7e-201363256
          AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56
                 +y+GVr ++ +gr++AeIrd ++    ++r++lg+f+t+eeAa a++ a+++l+g+
  Aradu.X3GS1 13 HYRGVRKRP-WGRYAAEIRDpWK----KTRVWLGTFDTPEEAALAYDGAARSLRGA 63
                 69*******.**********883....5*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541714.38E-221370IPR016177DNA-binding domain
CDDcd000185.45E-281372No hitNo description
PROSITE profilePS5103222.7211370IPR001471AP2/ERF domain
PfamPF008473.8E-131362IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.1E-311370IPR001471AP2/ERF domain
SMARTSM003803.5E-351376IPR001471AP2/ERF domain
PRINTSPR003675.9E-111425IPR001471AP2/ERF domain
PRINTSPR003675.9E-113652IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    Send to blast
MASSSSSASR EGHYRGVRKR PWGRYAAEIR DPWKKTRVWL GTFDTPEEAA LAYDGAARSL  60
RGAKAKTNFP PAPVAAAGGI CLDLNVNAPN SDHHRWPSVP VRAGVGGGGI FGEFLHTRVL  120
KDVDLAHQPH QPPPPHPIHH AAALAAHHHR RGEVTVAVAG GGVEQVAGSG STASYLGLVR  180
RGIPIDLNEP PPLWL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-211370563ATERF1
3gcc_A3e-211370563ATERF1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00645PBMTransfer from LOC_Os05g41760Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.X3GS1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015943144.11e-139ethylene-responsive transcription factor 12
TrEMBLA0A444WYQ51e-135A0A444WYQ5_ARAHY; Uncharacterized protein
STRINGAES638778e-75(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33034189
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.19e-37ERF domain protein 12