PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.XA9R1
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family CPP
Protein Properties Length: 481aa    MW: 53878.7 Da    PI: 4.3932
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.XA9R1genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR40.26.6e-13251291242
          TCR   2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 
                  +++gC+Ckks Cl +YCeCfaa+ +C+e C+Ce+C N++e+
  Aradu.XA9R1 251 SNNGCTCKKSACLLLYCECFAAKGYCAECCTCEGCLNRQEH 291
                  5789*********************************9986 PP
2TCR45.21.9e-14392431342
          TCR   3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 
                  k+gC+Ckk kC+++YCeCf a+ +Cse C Ce+C N+ee+
  Aradu.XA9R1 392 KRGCTCKKNKCVNLYCECFRAEIYCSEACACEGCLNREEH 431
                  79**********************************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM011142.0E-9250291IPR033467Tesmin/TSO1-like CXC domain
PROSITE profilePS5163426.232251430IPR005172CRC domain
PfamPF036383.6E-9253288IPR005172CRC domain
SMARTSM011145.4E-11390431IPR033467Tesmin/TSO1-like CXC domain
PfamPF036387.3E-11392428IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 481 aa     Download sequence    Send to blast
MDSSHEPSSS PLFSDSSNNL NNNNEIMDRP SDDLESSKNK NNEDTTTIPS SFSPFESSNP  60
SISNEVENSS PSKHHHEYDH DLNDDDYFLG ESYTPELVLS PETQSILLSG LRIGDDGDLL  120
EDLCDNNFEF NVESSQEWID SNLFADEILG IEPSLDHYYS PYPTGNEEDI DLMETVQCDD  180
EVNNSDLVII DAPIQEEEAP NFKLKPFGSN GKSVVRAVVD ETQSHQDTTS NDCVLISHDL  240
NKTIIQENSE SNNGCTCKKS ACLLLYCECF AAKGYCAECC TCEGCLNRQE HEDKVNDARD  300
KIKSRNPFAF SPEMVPSASN QEEEHEAAKD TSRELKPSKF FTYLPRVGLV ESNTISTNST  360
KHDADDDNIS KEKLNQTGGG YKKHASNTSD GKRGCTCKKN KCVNLYCECF RAEIYCSEAC  420
ACEGCLNREE HLHKINEAKE YIKRRYPLAF APRIVQTHLS SPNNTHHHHQ QQQGTKEVAD  480
A
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.XA9R1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020985888.10.0uncharacterized protein LOC107463138
RefseqXP_029144602.10.0uncharacterized protein LOC112705438
TrEMBLA0A444XXZ80.0A0A444XXZ8_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3044522
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22780.15e-26Tesmin/TSO1-like CXC domain-containing protein