PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.XAQ5U
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 523aa    MW: 60061.1 Da    PI: 8.2795
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.XAQ5UgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR152.31.9e-1678161289
         FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                  fY++YAk +GFs+r++ ++++   +ei+++  +Cs+egk +++ +    +++t+ +   +C a++ ++  k  g w ++k++l+H+H++
  Aradu.XAQ5U  78 FYRNYAKAAGFSTRVRCTNRK--GNEIKNQLITCSREGKWKSKISL---TEKTNLTAGLNCPARIYIHTLKdVGAWIISKVVLDHSHPC 161
                  9**************998776..8889**************99887...89999*************998879**************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031017.6E-1478162IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 523 aa     Download sequence    Send to blast
MDHSTSDCQL NPGEVDYEFE SNEVPETLGC RSILVWLYYI RHDWFLTRCI VQPLSVVDDE  60
LVPKVGMTFT TLEDARIFYR NYAKAAGFST RVRCTNRKGN EIKNQLITCS REGKWKSKIS  120
LTEKTNLTAG LNCPARIYIH TLKDVGAWII SKVVLDHSHP CYPSKAEMLK QHRELSMSIR  180
RTIENNEEAD LYEDRHIWVT IYLDHHFWAG MRSTQRSESM HSFFNKYITR NSSLIQFLKQ  240
YDNCLGSREQ AERESDAADF HTVIPCATKS SIEAQFQDAY THAKFREVQA QFRGKANCIT  300
RLKNSVLGYS VYEVGEQVSS SIFNKFVVIY DSVAAEVKCQ CLLFESRGIL CHYALSVLSF  360
EQVKRRHTHI KSSHDEKLME PRSKRFDQLV FHSQNICEFA SESEELTAIL HRVYDNVMAE  420
MESLRAKRKG TCSLSHEDAN LESVSELQSP PRIRTRGRPK NRLGSKLEKE IANATKKKKT  480
KLLSEINLFD AASAVHSNSS QYQGHVMNYQ FRVPAAGDNS LGV
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.XAQ5U
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371780.0HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020997233.10.0protein FAR-RED IMPAIRED RESPONSE 1-like
TrEMBLA0A445A8500.0A0A445A850_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22170.24e-24far-red elongated hypocotyls 3