PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.XT74J

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 253aa MW: 29663.9 Da PI: 9.052

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.XT74J	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	73.7	3.9e-23	81	170	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fY +Y++ F +rksk k+ +gei+++tfvC+++g+r+++ + +++r++++ tr++C a++++kk++ ++kw v+ + +HnH+l Aradu.XT74J 81 EFYTSYSRLKSFAIRKSKRVKN-AKGEIVSYTFVCNRQGFRHKKWLDkLDRKREHKPITRCECVAEMRIKKNHsNEKWFVSPFMDDHNHTL 170 6**************99998.8888**********99976646899999**************9*************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	1.3E-20	81	171	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 253 aa Download sequence Send to blast
MNNINHNPIS KSTNHESTIP DPEDGLLNEE TLFDMSILGD EAEFSNMMQT DIEPQAAQVP 60 SHVSIEYVLK MEFFTLGEAR EFYTSYSRLK SFAIRKSKRV KNAKGEIVSY TFVCNRQGFR 120 HKKWLDKLDR KREHKPITRC ECVAEMRIKK NHSNEKWFVS PFMDDHNHTL LFKRFIAYLP 180 SHRNMSDAEI AQMNSMRKVG ISIPKIYQSF VMQVGGFNLV RFTKQDMHNE VQKQHKEAEL 240 DFRSFYGTPV LQT

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.XT74J

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015953838.1	1e-157	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A445DVQ0	1e-141	A0A445DVQ0_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF9185	2	37

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-18	FAR1-related sequence 5