PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.XX4VT
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 416aa    MW: 47549.9 Da    PI: 8.0467
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.XX4VTgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1531.1e-1675162191
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                  +fY +YA+  GF  rk+ ++  + ng+i +r++vC+k g+r+ ++ k ++++r++ra tr++C+a+++   +      ++ +e+eHnH+l+p
  Aradu.XX4VT  75 EFYAKYAQCYGFVSRKDLKTV-DANGNINTRQLVCNKLGERHWKHLKkDNRQRERRAITRVNCRARIRFISH---YRTISVFESEHNHPLCP 162
                  6***********998886555.69999*************997765536889999************98777...568999*********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031018.7E-1575162IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 416 aa     Download sequence    Send to blast
MENDGKESYK DGDQSKDLSV EYECSSDESN DMMDVTVDEA ETDIINIDGF KKLITDLTIE  60
DIRGLMFDTK SQVCEFYAKY AQCYGFVSRK DLKTVDANGN INTRQLVCNK LGERHWKHLK  120
KDNRQRERRA ITRVNCRARI RFISHYRTIS VFESEHNHPL CPPKYRHLIA ANRGLNEADK  180
TQADSLRACV LRHYRNNHLT VDFETFYKFP VLTTCLKNFE KQAAELYTRN IFKLVKDEIE  240
AAGALNVTEY PNSGDIVEYN TISYNKDKDL FACEYRLFET RGLLCSHILG VLKHRNAKCT  300
RDAKSDFICS IGEQDSADDI VPTLRCGAMT SICWKLCHIS SKNSADSRKI SGDSAVVKSK  360
GAPRKAPKGQ KRRRCSHCKS SRHLIKTCPL LLKGDSLVEY SNAEDEPMVE ECDANK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1366372PKGQKRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.XX4VT
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025678994.11e-126protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444Z3470.0A0A444Z347_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1535229
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.16e-13FAR1 family protein