PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.Y3AAH
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 258aa    MW: 29695.5 Da    PI: 9.3792
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.Y3AAHgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.62.6e-092268555
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    +E++RR++++  +++L +llP +    ++ l   + + kA++YIksL+
  Aradu.Y3AAH 22 RRVIEKNRRNHMKMLYSKLNSLLPRP----KEPLPLPDQVNKAINYIKSLE 68
                 5689*********************9....899****************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.101.1E-81579IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.44E-91578IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.80E-51772No hitNo description
PROSITE profilePS5088811.2491767IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.9E-42373IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.8E-62368IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF033482.0E-6175209IPR005016Serine incorporator/TMS membrane protein
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0016020Cellular Componentmembrane
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    Send to blast
MNQLGSRSQA SPSSTNKKKI ERRVIEKNRR NHMKMLYSKL NSLLPRPKEP LPLPDQVNKA  60
INYIKSLEEK VKMAKEKRER SLGIGIRRKR TRGDCSGVDR QKPPQLEVHE IGSCVEIEMT  120
CGLDTQFIFY EIIRILNEEK IDVKSVNSSL IENFMYHVVR AEGSITLNIP LAENVLMIGV  180
KNQKDPRDGL HHGGWMMKII CWFLLILPSL LQFGVTKVSE RLKRFVNEPT SEIELQSDYQ  240
LLDFEINTDE LAELLGGH
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.Y3AAH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015950354.11e-145transcription factor bHLH162-like
TrEMBLA0A445AKC91e-136A0A445AKC9_ARAHY; Uncharacterized protein
STRINGGLYMA12G12880.12e-64(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9063498
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.11e-14bHLH family protein