PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.Y6I21
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB
Protein Properties Length: 235aa    MW: 26933.7 Da    PI: 10.1931
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.Y6I21genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.47.9e-09250348
                     SS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqkyl 48
                      WT eE + +  +++    +    +Wkt+a++++ g+t+ q+++r++k++
      Aradu.Y6I21  2 VWTWEENKAFESVIANCFQDaihnHWKTVAARLP-GKTPAQLQERFLKLM 50
                     7****************999**************.************986 PP
2Myb_DNA-binding353.3e-11164207347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       WT +E++l++++ + lG+  W++I+++  k+Rt  q++s+ qk+
      Aradu.Y6I21 164 HWTLQEHKLFLQGYEGLGKQ-WSKISSEYVKTRTYSQVVSHSQKF 207
                      6*****************99.********************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512947.828154IPR017930Myb domain
SMARTSM007170.016152IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.3E-5250IPR009057Homeodomain-like
SuperFamilySSF466892.51E-7260IPR009057Homeodomain-like
PfamPF002492.6E-6249IPR001005SANT/Myb domain
CDDcd001671.73E-5350No hitNo description
PROSITE profilePS5129413.631157212IPR017930Myb domain
SuperFamilySSF466891.01E-12158213IPR009057Homeodomain-like
SMARTSM007174.6E-6161210IPR001005SANT/Myb domain
TIGRFAMsTIGR015577.2E-11161211IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.601.2E-6164202IPR009057Homeodomain-like
PfamPF002499.5E-8164206IPR001005SANT/Myb domain
CDDcd001675.44E-4165203No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    Send to blast
QVWTWEENKA FESVIANCFQ DAIHNHWKTV AARLPGKTPA QLQERFLKLM TEVNAIKNGN  60
PENMNIMIPL PATSLEHSLL SIPVVNATPP PPPPPPHWTH HQHHRMEVMA PAADMPVPMH  120
ITLLSSSMSG ARREQNQHAN SNIIQHEPLH AASSNNNKRQ QTVHWTLQEH KLFLQGYEGL  180
GKQWSKISSE YVKTRTYSQV VSHSQKFFKR QEKRARGENL GRKSMLDITD YRTII
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.Y6I21
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020964712.12e-66uncharacterized protein LOC110265791
RefseqXP_025672624.12e-66uncharacterized protein LOC112771973
TrEMBLA0A445EIG21e-170A0A445EIG2_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2382823
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.19e-19MYB family protein