PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.YJC68
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 147aa    MW: 16691.9 Da    PI: 7.1113
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.YJC68genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR122.24.5e-0768104137
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCsk 37 
                  +fY +YAk+vGF  ++++++  ++++e++++   C+ 
  Aradu.YJC68  68 DFYASYAKKVGFISKIQNTNFDRMTKEMINQSIHCNW 104
                  6**********************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.3E-468104IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    Send to blast
MEFNLLETGC HAPASFTDDN TTHSSDNLLN SCDVEGEKSN KLPDHSCLVE DEIPRVGMQF  60
EKLKLAQDFY ASYAKKVGFI SKIQNTNFDR MTKEMINQSI HCNWRVSVGL VSKHPHERIR  120
LLPWGAEQGY IQSLTGRSKI GSYSRLI
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.YJC68
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016177944.13e-49protein FAR1-RELATED SEQUENCE 6-like
RefseqXP_025684794.13e-49protein FAR1-RELATED SEQUENCE 6-like
TrEMBLA0A445DFK41e-90A0A445DFK4_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14126217
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52520.11e-06FAR1-related sequence 6