PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.YL690
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 293aa    MW: 33594 Da    PI: 8.1624
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.YL690genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR123.51.8e-0743904591
         FAR1 45 kkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91
                 k+k + +++t+++   +C a++ ++  k  g w ++k++l+H+H+++p
  Aradu.YL690 43 KSKISPTEKTNPTAGLNCPARIYIHTLKdVGAWIISKVVLDHSHPCCP 90
                 3334568899**************998879***************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031014.1E-54690IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    Send to blast
MDHSSSDCLL NPGEVDYEFE SNEVPETLGC IISDMIGREG KWKSKISPTE KTNPTAGLNC  60
PARIYIHTLK DVGAWIISKV VLDHSHPCCP NKAEMLKQHR ELSMSIRRTI ENNDEADRHI  120
WIPIYLDHHF WAGMRSTQRS ESMHSFFNKY ITQNSSLIQF VKQYDNCLGS REQAERESDA  180
ADFHTVIPCS TKSSIEAQFQ DAYTHAKFRE VQAQFRGKAN CITRLKNSAL GYSVYEVGEK  240
FPAQYSTSSR LPTTQLQPRG ILCRHALSVL SFEQVSQVSP RYILERWSKK VKR
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.YL690
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371781e-170HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020981527.11e-108protein FAR-RED IMPAIRED RESPONSE 1-like
TrEMBLA0A445A1M91e-176A0A445A1M9_ARAHY; Uncharacterized protein
STRINGXP_004490233.15e-45(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.16e-25FAR1 family protein