PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.Z4AN4
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB
Protein Properties Length: 335aa    MW: 37922.9 Da    PI: 8.851
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.Z4AN4genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.58.4e-104187347
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                     +WT eE +l+ +a +++ ++   +W+++a++++ g+t  ++   ++ +
      Aradu.Z4AN4 41 KWTHEENKLFENALALHDKDtpdRWHRVAEMIP-GKTVLDVMKQYHEL 87
                     8********************************.******99999876 PP
2Myb_DNA-binding44.53.6e-14153197347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + k++G+g+W+ I+r +  +Rt+ q+ s+ qky
      Aradu.Z4AN4 153 PWTEEEHKLFLLGLKKYGKGDWRNISRNFVITRTPTQVASHAQKY 197
                      8*****************************99************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.604.8E-53488IPR009057Homeodomain-like
PROSITE profilePS512938.8773791IPR017884SANT domain
SMARTSM007171.4E-103890IPR001005SANT/Myb domain
SuperFamilySSF466892.97E-124096IPR009057Homeodomain-like
CDDcd001673.68E-84188No hitNo description
PfamPF002491.6E-84187IPR001005SANT/Myb domain
PROSITE profilePS5129420.486146202IPR017930Myb domain
SuperFamilySSF466899.33E-17147201IPR009057Homeodomain-like
TIGRFAMsTIGR015571.7E-17149201IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.603.9E-12150197IPR009057Homeodomain-like
SMARTSM007175.3E-13150200IPR001005SANT/Myb domain
CDDcd001671.27E-10153198No hitNo description
PfamPF002491.3E-12153197IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    Send to blast
MKWEVEVLSP SSPYVHHNNT THWFLGDNNI INNNNNRSST KWTHEENKLF ENALALHDKD  60
TPDRWHRVAE MIPGKTVLDV MKQYHELLAD VSDIENGLVP IPGYSTSTTT TTSPFTLDWV  120
NNSCSGYDGF KGIGAAAKRS SKTPEQERKK GVPWTEEEHK LFLLGLKKYG KGDWRNISRN  180
FVITRTPTQV ASHAQKYFIR QLSGGKDKRR ASIHDITTVN LTDNNRTLAN PSSEDSSKRS  240
TSPQHHHSMV FSNSNPIGKF QWNNNINNDN DDTKSNSGGG VSTMRFNNDD EAFMSHHYGV  300
NSSYGFKMQG QNMHKSALNE SSYLALQTQN IAFQM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2cjj_A3e-1538107776RADIALIS
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269|PubMed:11937495, ECO:0000269|PubMed:9118809}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.Z4AN4
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF2086840.0KF208684.1 Arachis hypogaea putative MYB-related protein 30 (MYB30) gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020991129.10.0transcription factor DIVARICATA
RefseqXP_025690845.10.0transcription factor DIVARICATA
SwissprotQ8S9H71e-109DIV_ANTMA; Transcription factor DIVARICATA
TrEMBLA0A445EW370.0A0A445EW37_ARAHY; Uncharacterized protein
STRINGXP_007146740.11e-145(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF46634162
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.17e-80MYB family protein
Publications ? help Back to Top
  1. Galego L,Almeida J
    Role of DIVARICATA in the control of dorsoventral asymmetry in Antirrhinum flowers.
    Genes Dev., 2002. 16(7): p. 880-91
    [PMID:11937495]
  2. Almeida J,Rocheta M,Galego L
    Genetic control of flower shape in Antirrhinum majus.
    Development, 1997. 124(7): p. 1387-92
    [PMID:9118809]