PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.ZAK5K

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 144aa MW: 16771.5 Da PI: 9.4556

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.ZAK5K	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	40.7	7.6e-13	11	86	1	88
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 +fY++YAk+vGF ++++ +++ +++ +++ +C++ ++++ + t+ +C a++ ++++k+g w+++++ l+ +H+ Aradu.ZAK5K 11 QFYQNYAKRVGFITKIRFTRRVGKDKVLKNQMITCNRGKTKDQ------------PRTNFNCPAMISIRLNKEGLWVISNVCLDYSHS 86 6***********************99999999998654444............34579***********************997 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	5.6E-10	11	87	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 144 aa Download sequence Send to blast
MCFGTLYDAN QFYQNYAKRV GFITKIRFTR RVGKDKVLKN QMITCNRGKT KDQPRTNFNC 60 PAMISIRLNK EGLWVISNVC LDYSHSCDLE MAKLLTRNRE MSMHMCRVIE ENDEAGVTPS 120 KTYQVLVGKV GYFENIKWLS YSIC

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.ZAK5K

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015938509.1	1e-72	protein FAR1-RELATED SEQUENCE 5-like
Refseq	XP_015960489.1	2e-75	protein FAR1-RELATED SEQUENCE 5-like
Refseq	XP_015962352.1	3e-73	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A445DEX2	8e-95	A0A445DEX2_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21	14	477

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43280.1	2e-10	FAR1 family protein