PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.ZJ7WT

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 218aa MW: 24838.1 Da PI: 8.0201

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.ZJ7WT	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63.7	5.4e-20	75	166	4	90
FAR1 4 neYAkevGFsvrkskskks...krngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 ++Y++ GFs+r+ k + +g i+++ fvCs++g+r+ ++ + ++++ +r++tr+gC+a++kv+ ++ +g+w+v+ ++ eHnH++ Aradu.ZJ7WT 75 EFYGRIKGFSIRRLKVGRCkkaGSEGDIIWQIFVCSRQGERDAKHVHrNDRKMDPRQVTRCGCNARIKVHVHSrNGRWYVDFFSDEHNHDML 166 579******9877655522267889**********9998774677778*************999*************985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	7.6E-18	75	166	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 218 aa Download sequence Send to blast
MEGTEEVSSN FQENVTSGVE EDPIENETFV AETKSVPIGA SQSDDQRDVI VLDGIGSFGA 60 IDFDALRAKE IMMIEFYGRI KGFSIRRLKV GRCKKAGSEG DIIWQIFVCS RQGERDAKHV 120 HRNDRKMDPR QVTRCGCNAR IKVHVHSRNG RWYVDFFSDE HNHDMLEARF RGMMRSHRAI 180 KMGDLHQINT MRSSGLRVST IFRAFANQSG GFEMVGFQ

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.ZJ7WT

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025702767.1	1e-140	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A445D6S4	1e-139	A0A445D6S4_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF3290	7	52

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	5e-16	FAR1-related sequence 5