PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.ZR8E2
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB_related
Protein Properties Length: 61aa    MW: 7331.49 Da    PI: 10.6552
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.ZR8E2genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.38.3e-091238229
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIar 29
                     + W++eE e +++a +++G++ Wk++  
      Aradu.ZR8E2 12 LQWSKEELEHFYKAYRKYGKD-WKKVLD 38
                     57*****************99.***975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF002492.0E-61338IPR001005SANT/Myb domain
SuperFamilySSF466891.01E-61337IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.1E-51348IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 61 aa     Download sequence    Send to blast
MQKRRLADML GLQWSKEELE HFYKAYRKYG KDWKKVLDQE SEILSPKKLG SRSSRTSNKK  60
V
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.ZR8E2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016197191.17e-15protein ALWAYS EARLY 3
RefseqXP_020981893.17e-15LOW QUALITY PROTEIN: protein ALWAYS EARLY 3-like
RefseqXP_025611505.18e-15protein ALWAYS EARLY 3 isoform X1
RefseqXP_025611506.17e-15protein ALWAYS EARLY 3 isoform X2
RefseqXP_025611507.17e-15protein ALWAYS EARLY 3 isoform X3
RefseqXP_025630068.16e-15protein ALWAYS EARLY 3 isoform X1
RefseqXP_025630070.16e-15protein ALWAYS EARLY 3 isoform X2
RefseqXP_025630071.17e-15protein ALWAYS EARLY 3 isoform X4
STRINGGLYMA17G02741.25e-14(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2106422
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21430.22e-14DNA binding